Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AL391825.1-201ENST00000457671 1364 ntBASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC018892.3-201ENST00000623986 2499 ntBASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 MTHFR-217ENST00000641820 1569 ntBASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC068587.6-202ENST00000641839 5619 ntBASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 MEIS3P1-201ENST00000495167 958 ntBASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC092337.1-201ENST00000568699 1129 ntBASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCN4BQ8IWT1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCN4BQ8IWT1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 MEP1AP4-201ENST00000423244 1087 ntBASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SCN4BQ8IWT1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCN4BQ8IWT1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms