Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.89■□□□□ 0.13
APLFQ8IW19 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.89■□□□□ 0.13
APLFQ8IW19 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
APLFQ8IW19 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.89■□□□□ 0.13
APLFQ8IW19 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.89■□□□□ 0.13
APLFQ8IW19 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
APLFQ8IW19 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
APLFQ8IW19 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.89■□□□□ 0.13
APLFQ8IW19 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.89■□□□□ 0.13
APLFQ8IW19 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
APLFQ8IW19 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.89■□□□□ 0.13
APLFQ8IW19 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
APLFQ8IW19 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
APLFQ8IW19 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
APLFQ8IW19 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
APLFQ8IW19 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC092919.2-201ENST00000623631 1645 ntBASIC15.88■□□□□ 0.13
APLFQ8IW19 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC109322.1-201ENST00000524499 1264 ntBASIC15.88■□□□□ 0.13
APLFQ8IW19 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.88■□□□□ 0.13
APLFQ8IW19 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC026120.1-201ENST00000611536 926 ntBASIC15.88■□□□□ 0.13
APLFQ8IW19 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.88■□□□□ 0.13
APLFQ8IW19 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC009093.7-201ENST00000623853 1223 ntBASIC15.88■□□□□ 0.13
APLFQ8IW19 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
APLFQ8IW19 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
APLFQ8IW19 AC010491.1-201ENST00000563101 2797 ntBASIC15.88■□□□□ 0.13
APLFQ8IW19 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 AL135999.2-201ENST00000622438 1686 ntBASIC15.88■□□□□ 0.13
APLFQ8IW19 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
APLFQ8IW19 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
APLFQ8IW19 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APLFQ8IW19 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
APLFQ8IW19 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
APLFQ8IW19 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.87■□□□□ 0.13
APLFQ8IW19 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
APLFQ8IW19 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.87■□□□□ 0.13
APLFQ8IW19 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.87■□□□□ 0.13
APLFQ8IW19 FAM86GP-201ENST00000448322 971 ntBASIC15.87■□□□□ 0.13
APLFQ8IW19 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.87■□□□□ 0.13
APLFQ8IW19 AC067863.1-201ENST00000494933 530 ntBASIC15.87■□□□□ 0.13
APLFQ8IW19 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
APLFQ8IW19 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
APLFQ8IW19 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.87■□□□□ 0.13
APLFQ8IW19 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
APLFQ8IW19 AL645728.2-201ENST00000641974 660 ntBASIC15.87■□□□□ 0.13
APLFQ8IW19 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.87■□□□□ 0.13
APLFQ8IW19 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.87■□□□□ 0.13
APLFQ8IW19 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APLFQ8IW19 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms