Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.08■□□□□ 0.16
RAPH1Q70E73 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAPH1Q70E73 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 PRYP6-201ENST00000514804 343 ntBASIC16.07■□□□□ 0.16
RAPH1Q70E73 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 SLC25A6P4-201ENST00000586535 553 ntBASIC16.07■□□□□ 0.16
RAPH1Q70E73 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 AC064836.3-201ENST00000607928 673 ntBASIC16.07■□□□□ 0.16
RAPH1Q70E73 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 AC104109.2-201ENST00000602919 1418 ntBASIC16.07■□□□□ 0.16
RAPH1Q70E73 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 SSR4P1-203ENST00000599569 2260 ntBASIC16.07■□□□□ 0.16
RAPH1Q70E73 AC136621.1-201ENST00000624017 2304 ntBASIC16.07■□□□□ 0.16
RAPH1Q70E73 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAPH1Q70E73 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAPH1Q70E73 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.06■□□□□ 0.16
RAPH1Q70E73 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAPH1Q70E73 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms