Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 AC018892.3-201ENST00000623986 2499 ntBASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 ACTBP8-201ENST00000403258 1108 ntBASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 FZD10-202ENST00000539839 3282 ntBASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CNKSR3Q6P9H4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 BX284668.4-201ENST00000453917 508 ntBASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNKSR3Q6P9H4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNKSR3Q6P9H4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.89■□□□□ 0.3
CNKSR3Q6P9H4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.89■□□□□ 0.29
CNKSR3Q6P9H4 AL096828.3-201ENST00000615354 462 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms