Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC010319.3-201ENST00000597028 470 ntBASIC17.85■□□□□ 0.45
CCDC62Q6P9F0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC62Q6P9F0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC62Q6P9F0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC62Q6P9F0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC62Q6P9F0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 MIR658-201ENST00000385210 100 ntBASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 MIR4259-201ENST00000584466 101 ntBASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 AL450472.2-201ENST00000603663 1156 ntBASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 AC018695.7-201ENST00000624587 2492 ntBASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC62Q6P9F0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC62Q6P9F0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 HLA-V-201ENST00000429037 534 ntBASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 RPS2P32-201ENST00000439199 892 ntBASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 USP32P1-208ENST00000506594 1164 ntBASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC62Q6P9F0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 SLED1-202ENST00000512051 380 ntBASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC62Q6P9F0 BTNL10-201ENST00000595971 695 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms