Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AC245100.3-201ENST00000441281 285 ntBASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AC010328.2-201ENST00000597698 1111 ntBASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM71Q2Q1W2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AC099548.2-209ENST00000480264 625 ntBASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AC084346.2-201ENST00000607097 949 ntBASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM71Q2Q1W2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM71Q2Q1W2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
TRIM71Q2Q1W2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM71Q2Q1W2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.21■□□□□ 0.34
TRIM71Q2Q1W2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.21■□□□□ 0.34
TRIM71Q2Q1W2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM71Q2Q1W2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 AGGF1P2-201ENST00000426656 2106 ntBASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 AC025279.2-201ENST00000569730 653 ntBASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 MST1L-201ENST00000442552 2185 ntBASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 AC022211.2-201ENST00000585075 2527 ntBASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM71Q2Q1W2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM71Q2Q1W2 AC006449.6-201ENST00000612330 2296 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms