Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 KLF2P4-201ENST00000451959 1225 ntBASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 KRT18P43-201ENST00000469825 1281 ntBASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 GNRHR2-203ENST00000581100 1187 ntBASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 AC124067.4-201ENST00000519691 2379 ntBASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 KRT43P-201ENST00000434019 910 ntBASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AC107373.2-201ENST00000607735 490 ntBASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AC084018.2-201ENST00000613093 2607 ntBASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 AC069224.1-201ENST00000566372 1715 ntBASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
SHROOM1Q2M3G4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM1Q2M3G4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM1Q2M3G4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM1Q2M3G4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM1Q2M3G4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHROOM1Q2M3G4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.39■□□□□ 0.54
SHROOM1Q2M3G4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AC005229.1-201ENST00000392885 409 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 MIR1908-201ENST00000410394 80 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 CSF2RBP1-201ENST00000447905 391 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 PTP4A1P2-201ENST00000546033 454 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AC015910.1-201ENST00000579400 975 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AL022328.1-201ENST00000610050 478 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms