Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDH1Q08174 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDH1Q08174 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDH1Q08174 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH1Q08174 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH1Q08174 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH1Q08174 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDH1Q08174 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH1Q08174 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH1Q08174 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 TMBIM7P-203ENST00000641617 1718 ntBASIC15.37■□□□□ 0.05
PCDH1Q08174 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH1Q08174 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
PCDH1Q08174 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 AC126755.1-201ENST00000525846 6405 ntBASIC15.36■□□□□ 0.05
PCDH1Q08174 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 NORAD-201ENST00000565493 5339 ntBASIC15.36■□□□□ 0.05
PCDH1Q08174 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 AC092384.3-202ENST00000564646 2873 ntBASIC15.36■□□□□ 0.05
PCDH1Q08174 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
PCDH1Q08174 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 MIR1233-2-201ENST00000408138 82 ntBASIC15.36■□□□□ 0.05
PCDH1Q08174 MIR1233-1-201ENST00000408722 82 ntBASIC15.36■□□□□ 0.05
PCDH1Q08174 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.36■□□□□ 0.05
PCDH1Q08174 HNRNPUP1-201ENST00000554987 333 ntBASIC15.36■□□□□ 0.05
PCDH1Q08174 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDH1Q08174 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDH1Q08174 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PCDH1Q08174 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH1Q08174 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 AC092850.2-201ENST00000623821 2697 ntBASIC15.35■□□□□ 0.05
PCDH1Q08174 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 AC126177.1-201ENST00000547829 2218 ntBASIC15.35■□□□□ 0.05
PCDH1Q08174 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH1Q08174 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH1Q08174 HLA-J-203ENST00000494367 1087 ntBASIC15.35■□□□□ 0.05
PCDH1Q08174 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 RN7SL828P-201ENST00000607615 303 ntBASIC15.35■□□□□ 0.05
PCDH1Q08174 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH1Q08174 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PCDH1Q08174 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH1Q08174 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDH1Q08174 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH1Q08174 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms