Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 C1QBPP1-201ENST00000400117 770 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 KRT43P-201ENST00000434019 910 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC120045.2-201ENST00000567334 178 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC124283.3-201ENST00000570869 594 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC015910.1-201ENST00000579400 975 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 AC092364.2-201ENST00000596710 2692 ntBASIC17.23■□□□□ 0.35
CDC42EP1Q00587 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 ACA64.2-201ENST00000459014 129 ntBASIC17.23■□□□□ 0.35
CDC42EP1Q00587 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 IGHV3-71-201ENST00000523324 359 ntBASIC17.23■□□□□ 0.35
CDC42EP1Q00587 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 AL008721.1-201ENST00000609964 604 ntBASIC17.23■□□□□ 0.35
CDC42EP1Q00587 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.23■□□□□ 0.35
CDC42EP1Q00587 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 LINC02447-202ENST00000501888 2146 ntBASIC17.23■□□□□ 0.35
CDC42EP1Q00587 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42EP1Q00587 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 AC006449.5-201ENST00000610658 2098 ntBASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ACKR1-201ENST00000368121 1240 ntBASIC17.22■□□□□ 0.35
CDC42EP1Q00587 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 AC026410.3-201ENST00000514280 936 ntBASIC17.22■□□□□ 0.35
CDC42EP1Q00587 PTP4A1P2-201ENST00000546033 454 ntBASIC17.22■□□□□ 0.35
CDC42EP1Q00587 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.22■□□□□ 0.35
CDC42EP1Q00587 AC008735.3-201ENST00000596646 500 ntBASIC17.22■□□□□ 0.35
CDC42EP1Q00587 MIR6805-201ENST00000615055 62 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms