Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLDN2P57739 AC007389.4-201ENST00000454674 793 ntBASIC15.66■□□□□ 0.1
CLDN2P57739 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN2P57739 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN2P57739 SLED1-202ENST00000512051 380 ntBASIC15.66■□□□□ 0.1
CLDN2P57739 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN2P57739 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CLDN2P57739 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN2P57739 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN2P57739 AC017083.2-201ENST00000608069 979 ntBASIC15.66■□□□□ 0.1
CLDN2P57739 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN2P57739 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN2P57739 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN2P57739 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.66■□□□□ 0.1
CLDN2P57739 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN2P57739 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 AC136604.1-201ENST00000418535 575 ntBASIC15.65■□□□□ 0.1
CLDN2P57739 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 AC008735.3-201ENST00000596646 500 ntBASIC15.65■□□□□ 0.1
CLDN2P57739 AC010319.3-201ENST00000597028 470 ntBASIC15.65■□□□□ 0.1
CLDN2P57739 AC097359.3-201ENST00000603982 1210 ntBASIC15.65■□□□□ 0.1
CLDN2P57739 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN2P57739 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN2P57739 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN2P57739 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN2P57739 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CLDN2P57739 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN2P57739 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN2P57739 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLDN2P57739 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN2P57739 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN2P57739 AL596087.1-201ENST00000400979 1969 ntBASIC15.64■□□□□ 0.09
CLDN2P57739 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN2P57739 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN2P57739 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN2P57739 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN2P57739 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN2P57739 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN2P57739 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN2P57739 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN2P57739 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN2P57739 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms