Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH12P55289 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH12P55289 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH12P55289 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH12P55289 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH12P55289 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH12P55289 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH12P55289 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH12P55289 MYO15B-237ENST00000642007 4893 ntBASIC14.91□□□□□ -0.02
CDH12P55289 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDH12P55289 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH12P55289 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH12P55289 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH12P55289 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 AC092127.1-201ENST00000567093 3455 ntBASIC14.9□□□□□ -0.02
CDH12P55289 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 AC245100.5-201ENST00000452108 331 ntBASIC14.9□□□□□ -0.02
CDH12P55289 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.9□□□□□ -0.02
CDH12P55289 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH12P55289 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.9□□□□□ -0.02
CDH12P55289 AL365330.1-201ENST00000607459 531 ntBASIC14.9□□□□□ -0.02
CDH12P55289 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH12P55289 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH12P55289 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH12P55289 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH12P55289 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH12P55289 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.89□□□□□ -0.03
CDH12P55289 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.89□□□□□ -0.03
CDH12P55289 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH12P55289 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH12P55289 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH12P55289 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH12P55289 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH12P55289 AC090616.6-203ENST00000579186 1945 ntBASIC14.89□□□□□ -0.03
CDH12P55289 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH12P55289 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH12P55289 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms