Protein–RNA interactions for Protein: P49221

TGM4, Protein-glutamine gamma-glutamyltransferase 4, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGM4P49221 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TGM4P49221 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
TGM4P49221 C8orf49-201ENST00000525043 1968 ntBASIC14.38□□□□□ -0.11
TGM4P49221 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TGM4P49221 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.38□□□□□ -0.11
TGM4P49221 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TGM4P49221 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TGM4P49221 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TGM4P49221 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TGM4P49221 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 MRPL3P1-201ENST00000400109 1033 ntBASIC14.37□□□□□ -0.11
TGM4P49221 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.37□□□□□ -0.11
TGM4P49221 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 AC009078.2-202ENST00000463353 338 ntBASIC14.37□□□□□ -0.11
TGM4P49221 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.37□□□□□ -0.11
TGM4P49221 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.37□□□□□ -0.11
TGM4P49221 SLC25A6P4-201ENST00000586535 553 ntBASIC14.37□□□□□ -0.11
TGM4P49221 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.37□□□□□ -0.11
TGM4P49221 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.37□□□□□ -0.11
TGM4P49221 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 AC079781.5-202ENST00000641784 3743 ntBASIC14.37□□□□□ -0.11
TGM4P49221 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.37□□□□□ -0.11
TGM4P49221 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TGM4P49221 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TGM4P49221 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 HAUS4P1-201ENST00000406739 1145 ntBASIC14.36□□□□□ -0.11
TGM4P49221 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 AL031284.1-201ENST00000419297 478 ntBASIC14.36□□□□□ -0.11
TGM4P49221 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 KRT18P27-201ENST00000427733 1299 ntBASIC14.36□□□□□ -0.11
TGM4P49221 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 FDX1P1-201ENST00000449115 551 ntBASIC14.36□□□□□ -0.11
TGM4P49221 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.36□□□□□ -0.11
TGM4P49221 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.36□□□□□ -0.11
TGM4P49221 MIR3909-201ENST00000579518 119 ntBASIC14.36□□□□□ -0.11
TGM4P49221 AC008667.4-201ENST00000607370 168 ntBASIC14.36□□□□□ -0.11
TGM4P49221 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.36□□□□□ -0.11
TGM4P49221 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.36□□□□□ -0.11
TGM4P49221 AC008735.5-201ENST00000623544 497 ntBASIC14.36□□□□□ -0.11
TGM4P49221 FAM215A-202ENST00000632077 792 ntBASIC14.36□□□□□ -0.11
TGM4P49221 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.36□□□□□ -0.11
TGM4P49221 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TGM4P49221 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms