Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.03■□□□□ -0
GABRA4P48169 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.03■□□□□ -0
GABRA4P48169 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 AC239800.4-201ENST00000603712 296 ntBASIC15.03■□□□□ -0
GABRA4P48169 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GABRA4P48169 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 AC018695.7-201ENST00000624587 2492 ntBASIC15.03■□□□□ -0
GABRA4P48169 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.03■□□□□ -0
GABRA4P48169 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GABRA4P48169 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.03■□□□□ -0
GABRA4P48169 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
GABRA4P48169 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.02■□□□□ -0
GABRA4P48169 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
GABRA4P48169 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.02■□□□□ -0
GABRA4P48169 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.02■□□□□ -0
GABRA4P48169 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.02■□□□□ -0
GABRA4P48169 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.02■□□□□ -0
GABRA4P48169 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.02■□□□□ -0
GABRA4P48169 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.02■□□□□ -0
GABRA4P48169 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.02■□□□□ -0
GABRA4P48169 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.02■□□□□ -0
GABRA4P48169 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.02■□□□□ -0
GABRA4P48169 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.02■□□□□ -0
GABRA4P48169 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GABRA4P48169 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GABRA4P48169 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GABRA4P48169 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GABRA4P48169 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.02□□□□□ -0.01
GABRA4P48169 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GABRA4P48169 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GABRA4P48169 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.02□□□□□ -0.01
GABRA4P48169 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.02□□□□□ -0.01
GABRA4P48169 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GABRA4P48169 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GABRA4P48169 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.02□□□□□ -0.01
GABRA4P48169 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GABRA4P48169 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
GABRA4P48169 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 PKD1P5-201ENST00000532415 10291 ntBASIC15.01□□□□□ -0.01
GABRA4P48169 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.01□□□□□ -0.01
GABRA4P48169 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.01□□□□□ -0.01
GABRA4P48169 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.01□□□□□ -0.01
GABRA4P48169 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.01□□□□□ -0.01
GABRA4P48169 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
GABRA4P48169 AC092552.1-201ENST00000547243 906 ntBASIC15.01□□□□□ -0.01
GABRA4P48169 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 AC000095.1-201ENST00000603208 874 ntBASIC15.01□□□□□ -0.01
GABRA4P48169 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
GABRA4P48169 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GABRA4P48169 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GABRA4P48169 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.01□□□□□ -0.01
GABRA4P48169 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
GABRA4P48169 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms