Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.62■□□□□ 0.25
MTHFRP42898 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
MTHFRP42898 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 PCDH8P1-201ENST00000428983 2773 ntBASIC16.61■□□□□ 0.25
MTHFRP42898 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.61■□□□□ 0.25
MTHFRP42898 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 TOMM22P5-201ENST00000416399 439 ntBASIC16.61■□□□□ 0.25
MTHFRP42898 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.61■□□□□ 0.25
MTHFRP42898 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.61■□□□□ 0.25
MTHFRP42898 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.61■□□□□ 0.25
MTHFRP42898 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.61■□□□□ 0.25
MTHFRP42898 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.61■□□□□ 0.25
MTHFRP42898 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 AC120045.2-201ENST00000567334 178 ntBASIC16.61■□□□□ 0.25
MTHFRP42898 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.61■□□□□ 0.25
MTHFRP42898 AC243960.2-201ENST00000600996 747 ntBASIC16.61■□□□□ 0.25
MTHFRP42898 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.61■□□□□ 0.25
MTHFRP42898 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 AC046158.3-201ENST00000624947 2558 ntBASIC16.61■□□□□ 0.25
MTHFRP42898 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MTHFRP42898 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MTHFRP42898 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MTHFRP42898 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 C1QBPP1-201ENST00000400117 770 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.6■□□□□ 0.25
MTHFRP42898 MIR1247-201ENST00000408206 136 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 TARDBPP1-201ENST00000442013 1203 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 AC245100.5-201ENST00000452108 331 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 FTH1P14-201ENST00000482930 551 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.6■□□□□ 0.25
MTHFRP42898 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 MIR3615-201ENST00000581999 87 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.6■□□□□ 0.25
MTHFRP42898 AL139099.5-201ENST00000635274 300 ntBASIC16.6■□□□□ 0.25
MTHFRP42898 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms