Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KRT20P35900 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KRT20P35900 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 TFAMP1-201ENST00000412727 736 ntBASIC15.23■□□□□ 0.03
KRT20P35900 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT20P35900 UPF3AP3-201ENST00000420996 769 ntBASIC15.23■□□□□ 0.03
KRT20P35900 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 ALG1L5P-201ENST00000482043 771 ntBASIC15.23■□□□□ 0.03
KRT20P35900 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.23■□□□□ 0.03
KRT20P35900 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.23■□□□□ 0.03
KRT20P35900 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
KRT20P35900 AL135744.1-201ENST00000565098 629 ntBASIC15.23■□□□□ 0.03
KRT20P35900 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.23■□□□□ 0.03
KRT20P35900 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT20P35900 AC099522.2-201ENST00000607001 744 ntBASIC15.23■□□□□ 0.03
KRT20P35900 AC092902.6-201ENST00000641783 218 ntBASIC15.23■□□□□ 0.03
KRT20P35900 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT20P35900 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT20P35900 ELL2P1-201ENST00000413990 1906 ntBASIC15.23■□□□□ 0.03
KRT20P35900 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
KRT20P35900 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KRT20P35900 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT20P35900 SBF1P1-201ENST00000444527 5631 ntBASIC15.23■□□□□ 0.03
KRT20P35900 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
KRT20P35900 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 AC006058.4-201ENST00000624016 1670 ntBASIC15.22■□□□□ 0.03
KRT20P35900 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 OR2I1P-210ENST00000642037 4691 ntBASIC15.22■□□□□ 0.03
KRT20P35900 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 GPX1P2-201ENST00000429271 606 ntBASIC15.22■□□□□ 0.03
KRT20P35900 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 TIMM8BP1-201ENST00000452384 211 ntBASIC15.22■□□□□ 0.03
KRT20P35900 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 IGHV3-62-201ENST00000520057 340 ntBASIC15.22■□□□□ 0.03
KRT20P35900 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 AC026120.1-201ENST00000611536 926 ntBASIC15.22■□□□□ 0.03
KRT20P35900 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KRT20P35900 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 PRAL-201ENST00000624952 3286 ntBASIC15.22■□□□□ 0.03
KRT20P35900 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms