Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
CLCN1P35523 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN1P35523 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.19■□□□□ 0.5
CLCN1P35523 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.19■□□□□ 0.5
CLCN1P35523 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN1P35523 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 TP73-AS1-207ENST00000624167 988 ntBASIC18.19■□□□□ 0.5
CLCN1P35523 AC107918.4-202ENST00000641623 219 ntBASIC18.19■□□□□ 0.5
CLCN1P35523 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN1P35523 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CLCN1P35523 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CLCN1P35523 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCN1P35523 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN1P35523 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.18■□□□□ 0.5
CLCN1P35523 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN1P35523 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN1P35523 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLCN1P35523 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCN1P35523 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 AL691432.3-201ENST00000621860 400 ntBASIC18.18■□□□□ 0.5
CLCN1P35523 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCN1P35523 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.18■□□□□ 0.5
CLCN1P35523 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCN1P35523 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.17■□□□□ 0.5
CLCN1P35523 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 RPS2P1-201ENST00000434010 821 ntBASIC18.17■□□□□ 0.5
CLCN1P35523 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 RNPS1P1-201ENST00000507437 918 ntBASIC18.17■□□□□ 0.5
CLCN1P35523 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.17■□□□□ 0.5
CLCN1P35523 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms