Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 AC079781.4-201ENST00000641908 219 ntBASIC16.8■□□□□ 0.28
KRT3P12035 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
KRT3P12035 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT3P12035 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT3P12035 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRT3P12035 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
KRT3P12035 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT3P12035 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT3P12035 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
KRT3P12035 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT3P12035 SPDYE7P-202ENST00000420373 878 ntBASIC16.79■□□□□ 0.28
KRT3P12035 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT3P12035 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT3P12035 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT3P12035 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
KRT3P12035 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 MIR4453-201ENST00000584019 89 ntBASIC16.79■□□□□ 0.28
KRT3P12035 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 MIR6080-201ENST00000617359 66 ntBASIC16.79■□□□□ 0.28
KRT3P12035 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
KRT3P12035 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT3P12035 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT3P12035 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT3P12035 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT3P12035 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
KRT3P12035 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.78■□□□□ 0.28
KRT3P12035 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT3P12035 EEF1DP4-201ENST00000446006 880 ntBASIC16.78■□□□□ 0.28
KRT3P12035 PHKG1P2-201ENST00000457537 863 ntBASIC16.78■□□□□ 0.28
KRT3P12035 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT3P12035 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 AL512356.2-201ENST00000546955 174 ntBASIC16.78■□□□□ 0.28
KRT3P12035 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
KRT3P12035 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
KRT3P12035 AL450472.2-201ENST00000603663 1156 ntBASIC16.78■□□□□ 0.28
KRT3P12035 RN7SL828P-201ENST00000607615 303 ntBASIC16.78■□□□□ 0.28
KRT3P12035 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT3P12035 AL691403.2-201ENST00000618460 490 ntBASIC16.78■□□□□ 0.28
KRT3P12035 LINC00628-201ENST00000628516 1289 ntBASIC16.78■□□□□ 0.28
KRT3P12035 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 AC092850.2-201ENST00000623821 2697 ntBASIC16.78■□□□□ 0.28
KRT3P12035 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT3P12035 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT3P12035 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms