Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AC087641.1-201ENST00000557561 1021 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 RN7SL850P-201ENST00000579959 291 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 CYP2A7P1-201ENST00000595391 815 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 AC064862.7-201ENST00000604520 867 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 AL139288.1-201ENST00000623748 933 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMIM17P0DL12 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SMIM17P0DL12 CDC14C-201ENST00000428251 1719 ntBASIC11.96□□□□□ -0.49
SMIM17P0DL12 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.96□□□□□ -0.5
SMIM17P0DL12 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SMIM17P0DL12 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 AC023908.3-201ENST00000564211 3047 ntBASIC11.96□□□□□ -0.5
SMIM17P0DL12 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.96□□□□□ -0.5
SMIM17P0DL12 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.96□□□□□ -0.5
SMIM17P0DL12 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
SMIM17P0DL12 AP003680.1-201ENST00000598970 3660 ntBASIC11.96□□□□□ -0.5
SMIM17P0DL12 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMIM17P0DL12 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 AL353732.1-201ENST00000569618 1459 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 AC015656.1-201ENST00000624209 3578 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 AP005117.1-201ENST00000584346 1413 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 SNX33P1-201ENST00000592116 1762 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 AL031133.1-201ENST00000406807 723 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 AC139887.3-201ENST00000568585 713 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 MIR4492-201ENST00000581627 80 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.95□□□□□ -0.5
SMIM17P0DL12 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SMIM17P0DL12 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMIM17P0DL12 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM17P0DL12 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SMIM17P0DL12 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms