Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 DNAJB3-202ENST00000449667 1266 ntBASIC16.5■□□□□ 0.23
CD48P09326 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 MIR6080-201ENST00000617359 66 ntBASIC16.5■□□□□ 0.23
CD48P09326 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.5■□□□□ 0.23
CD48P09326 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD48P09326 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.5■□□□□ 0.23
CD48P09326 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.49■□□□□ 0.23
CD48P09326 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CD48P09326 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.49■□□□□ 0.23
CD48P09326 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CD48P09326 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CD48P09326 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.49■□□□□ 0.23
CD48P09326 HIST3H2BA-201ENST00000436555 524 ntBASIC16.49■□□□□ 0.23
CD48P09326 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.49■□□□□ 0.23
CD48P09326 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.49■□□□□ 0.23
CD48P09326 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.49■□□□□ 0.23
CD48P09326 AC087481.3-201ENST00000602886 1894 ntBASIC16.49■□□□□ 0.23
CD48P09326 RN7SL828P-201ENST00000607615 303 ntBASIC16.49■□□□□ 0.23
CD48P09326 AC007967.4-201ENST00000614700 386 ntBASIC16.49■□□□□ 0.23
CD48P09326 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CD48P09326 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD48P09326 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 TSPY26P-202ENST00000565928 3884 ntBASIC16.48■□□□□ 0.23
CD48P09326 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 AL139400.1-201ENST00000366220 510 ntBASIC16.48■□□□□ 0.23
CD48P09326 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CD48P09326 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.48■□□□□ 0.23
CD48P09326 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.48■□□□□ 0.23
CD48P09326 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.48■□□□□ 0.23
CD48P09326 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.48■□□□□ 0.23
CD48P09326 AC109322.1-201ENST00000524499 1264 ntBASIC16.48■□□□□ 0.23
CD48P09326 SNHG9-202ENST00000564014 471 ntBASIC16.48■□□□□ 0.23
CD48P09326 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 AP001059.3-201ENST00000619053 235 ntBASIC16.48■□□□□ 0.23
CD48P09326 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.48■□□□□ 0.23
CD48P09326 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CD48P09326 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CD48P09326 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.48■□□□□ 0.23
CD48P09326 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CD48P09326 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms