Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNA5SP486-201ENST00000515961 83 ntBASIC16.69■□□□□ 0.26
RB1P06400 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RB1P06400 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.69■□□□□ 0.26
RB1P06400 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.69■□□□□ 0.26
RB1P06400 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.69■□□□□ 0.26
RB1P06400 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.69■□□□□ 0.26
RB1P06400 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.69■□□□□ 0.26
RB1P06400 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 AL138709.1-201ENST00000614840 1693 ntBASIC16.69■□□□□ 0.26
RB1P06400 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.69■□□□□ 0.26
RB1P06400 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RB1P06400 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.68■□□□□ 0.26
RB1P06400 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RB1P06400 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RB1P06400 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RB1P06400 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RB1P06400 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.68■□□□□ 0.26
RB1P06400 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RB1P06400 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.68■□□□□ 0.26
RB1P06400 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.68■□□□□ 0.26
RB1P06400 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RB1P06400 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 AP006547.1-201ENST00000563435 692 ntBASIC16.68■□□□□ 0.26
RB1P06400 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.68■□□□□ 0.26
RB1P06400 AC006453.4-201ENST00000636949 1252 ntBASIC16.68■□□□□ 0.26
RB1P06400 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 AC015818.8-201ENST00000587907 1519 ntBASIC16.68■□□□□ 0.26
RB1P06400 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 AC005915.1-201ENST00000624912 2018 ntBASIC16.68■□□□□ 0.26
RB1P06400 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RB1P06400 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 OR6D1P-203ENST00000641209 4860 ntBASIC16.68■□□□□ 0.26
RB1P06400 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.68■□□□□ 0.26
RB1P06400 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RB1P06400 AC134407.2-201ENST00000625089 1978 ntBASIC16.68■□□□□ 0.26
RB1P06400 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms