Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRNA1P02708 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CHRNA1P02708 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 ACKR1-201ENST00000368121 1240 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
CHRNA1P02708 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRNA1P02708 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.17■□□□□ 0.34
CHRNA1P02708 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 AC026954.1-201ENST00000429771 1293 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 AL355994.2-201ENST00000447882 704 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CHRNA1P02708 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 AC022137.2-201ENST00000503482 481 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 FAM8A2P-201ENST00000528813 1142 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRNA1P02708 MIR4313-201ENST00000580760 101 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 RN7SL219P-201ENST00000582872 296 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.17■□□□□ 0.34
CHRNA1P02708 GPR182-203ENST00000622922 591 ntBASIC17.17■□□□□ 0.34
CHRNA1P02708 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRNA1P02708 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHRNA1P02708 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNA1P02708 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CHRNA1P02708 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CHRNA1P02708 TNRC18P3-201ENST00000441896 2691 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 AC092364.2-201ENST00000596710 2692 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
CHRNA1P02708 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CHRNA1P02708 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 OR6D1P-202ENST00000641007 5290 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRNA1P02708 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHRNA1P02708 FAM21FP-201ENST00000426241 1131 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CHRNA1P02708 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRNA1P02708 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.16■□□□□ 0.34
CHRNA1P02708 AC015910.1-201ENST00000579400 975 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 AC093813.1-201ENST00000605066 256 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 AC107373.2-201ENST00000607735 490 ntBASIC17.16■□□□□ 0.34
CHRNA1P02708 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CHRNA1P02708 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRNA1P02708 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHRNA1P02708 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRNA1P02708 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.16■□□□□ 0.34
CHRNA1P02708 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRNA1P02708 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRNA1P02708 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA1P02708 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA1P02708 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA1P02708 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms