Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.95■□□□□ 0.3
TIMP1P01033 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP1P01033 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TIMP1P01033 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.95■□□□□ 0.3
TIMP1P01033 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP1P01033 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.95■□□□□ 0.3
TIMP1P01033 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TIMP1P01033 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.95■□□□□ 0.3
TIMP1P01033 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 AC018470.1-201ENST00000624790 3129 ntBASIC16.95■□□□□ 0.3
TIMP1P01033 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP1P01033 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TIMP1P01033 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 TUBBP5-203ENST00000508529 1334 ntBASIC16.95■□□□□ 0.3
TIMP1P01033 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.94■□□□□ 0.3
TIMP1P01033 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.94■□□□□ 0.3
TIMP1P01033 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.94■□□□□ 0.3
TIMP1P01033 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.94■□□□□ 0.3
TIMP1P01033 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.94■□□□□ 0.3
TIMP1P01033 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.94■□□□□ 0.3
TIMP1P01033 AL353726.2-201ENST00000623259 884 ntBASIC16.94■□□□□ 0.3
TIMP1P01033 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 AC018892.3-201ENST00000623986 2499 ntBASIC16.94■□□□□ 0.3
TIMP1P01033 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TIMP1P01033 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.94■□□□□ 0.3
TIMP1P01033 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMP1P01033 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TIMP1P01033 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TIMP1P01033 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TIMP1P01033 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TIMP1P01033 Z97180.1-201ENST00000445173 988 ntBASIC16.93■□□□□ 0.3
TIMP1P01033 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.93■□□□□ 0.3
TIMP1P01033 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 FTLP10-202ENST00000505798 471 ntBASIC16.93■□□□□ 0.3
TIMP1P01033 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.93■□□□□ 0.3
TIMP1P01033 AC134698.3-201ENST00000523880 214 ntBASIC16.93■□□□□ 0.3
TIMP1P01033 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.93■□□□□ 0.3
TIMP1P01033 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMP1P01033 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.93■□□□□ 0.3
TIMP1P01033 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TIMP1P01033 MIR3907-201ENST00000579424 151 ntBASIC16.93■□□□□ 0.3
TIMP1P01033 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.93■□□□□ 0.3
TIMP1P01033 ENPP7P14-201ENST00000621765 1040 ntBASIC16.93■□□□□ 0.3
TIMP1P01033 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TIMP1P01033 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.93■□□□□ 0.3
TIMP1P01033 AC092978.1-202ENST00000637590 1327 ntBASIC16.93■□□□□ 0.3
TIMP1P01033 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TIMP1P01033 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms