Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 FAM8A4P-201ENST00000435433 1213 ntBASIC17.9■□□□□ 0.46
ALDH1A1P00352 RN7SL818P-201ENST00000485099 259 ntBASIC17.9■□□□□ 0.46
ALDH1A1P00352 AC022217.1-201ENST00000521069 738 ntBASIC17.9■□□□□ 0.46
ALDH1A1P00352 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 RN7SL725P-201ENST00000606439 259 ntBASIC17.9■□□□□ 0.46
ALDH1A1P00352 AL023803.2-201ENST00000620080 638 ntBASIC17.9■□□□□ 0.46
ALDH1A1P00352 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.9■□□□□ 0.46
ALDH1A1P00352 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALDH1A1P00352 AC134407.2-201ENST00000625089 1978 ntBASIC17.9■□□□□ 0.46
ALDH1A1P00352 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.89■□□□□ 0.46
ALDH1A1P00352 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ALDH1A1P00352 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 AC104784.1-201ENST00000473096 294 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 NUP210P1-202ENST00000504322 710 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 IQSEC3P1-201ENST00000538799 536 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 AL161670.2-201ENST00000557650 1227 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 RN7SL574P-201ENST00000581512 297 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 AL645939.5-201ENST00000606834 243 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 AC018635.2-201ENST00000608625 364 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 ENPP7P14-201ENST00000621765 1040 ntBASIC17.89■□□□□ 0.45
ALDH1A1P00352 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALDH1A1P00352 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.89■□□□□ 0.45
ALDH1A1P00352 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.88■□□□□ 0.45
ALDH1A1P00352 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 RNU1-114P-201ENST00000365297 166 ntBASIC17.88■□□□□ 0.45
ALDH1A1P00352 AL355334.1-201ENST00000417713 215 ntBASIC17.88■□□□□ 0.45
ALDH1A1P00352 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms