Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.63■□□□□ 0.09
PEX1O43933 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PEX1O43933 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.63■□□□□ 0.09
PEX1O43933 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 MIR648-201ENST00000385046 94 ntBASIC15.63■□□□□ 0.09
PEX1O43933 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.63■□□□□ 0.09
PEX1O43933 RHOQP3-201ENST00000437982 621 ntBASIC15.63■□□□□ 0.09
PEX1O43933 PAWRP1-201ENST00000451083 565 ntBASIC15.63■□□□□ 0.09
PEX1O43933 AC004967.1-201ENST00000453589 447 ntBASIC15.63■□□□□ 0.09
PEX1O43933 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.63■□□□□ 0.09
PEX1O43933 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.63■□□□□ 0.09
PEX1O43933 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.63■□□□□ 0.09
PEX1O43933 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.63■□□□□ 0.09
PEX1O43933 AC023141.13-201ENST00000604991 943 ntBASIC15.63■□□□□ 0.09
PEX1O43933 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 AC007191.1-201ENST00000623179 2995 ntBASIC15.63■□□□□ 0.09
PEX1O43933 AC134684.3-201ENST00000641758 218 ntBASIC15.63■□□□□ 0.09
PEX1O43933 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.63■□□□□ 0.09
PEX1O43933 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PEX1O43933 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PEX1O43933 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.63■□□□□ 0.09
PEX1O43933 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PEX1O43933 CICP4-201ENST00000447359 2812 ntBASIC15.63■□□□□ 0.09
PEX1O43933 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 AC104581.4-201ENST00000623126 3052 ntBASIC15.62■□□□□ 0.09
PEX1O43933 LINC00528-201ENST00000600723 2160 ntBASIC15.62■□□□□ 0.09
PEX1O43933 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 KRT8P49-201ENST00000604166 1432 ntBASIC15.62■□□□□ 0.09
PEX1O43933 AC025580.3-201ENST00000617932 1424 ntBASIC15.62■□□□□ 0.09
PEX1O43933 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PEX1O43933 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PEX1O43933 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 AC211486.1-202ENST00000416371 468 ntBASIC15.62■□□□□ 0.09
PEX1O43933 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.62■□□□□ 0.09
PEX1O43933 AC092183.1-201ENST00000469884 875 ntBASIC15.62■□□□□ 0.09
PEX1O43933 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.62■□□□□ 0.09
PEX1O43933 AC211476.1-201ENST00000503899 468 ntBASIC15.62■□□□□ 0.09
PEX1O43933 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 KRT19P2-202ENST00000557173 1012 ntBASIC15.62■□□□□ 0.09
PEX1O43933 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.62■□□□□ 0.09
PEX1O43933 PDPK2P-202ENST00000562415 1191 ntBASIC15.62■□□□□ 0.09
PEX1O43933 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
PEX1O43933 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.62■□□□□ 0.09
PEX1O43933 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 C20orf181-201ENST00000623918 480 ntBASIC15.62■□□□□ 0.09
PEX1O43933 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 AC139749.1-202ENST00000617529 3139 ntBASIC15.62■□□□□ 0.09
PEX1O43933 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.62■□□□□ 0.09
PEX1O43933 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PEX1O43933 AP003680.1-201ENST00000598970 3660 ntBASIC15.62■□□□□ 0.09
PEX1O43933 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PEX1O43933 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms