Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.91□□□□□ -0.18
XRCC2O43543 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
XRCC2O43543 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
XRCC2O43543 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
XRCC2O43543 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
XRCC2O43543 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.9□□□□□ -0.18
XRCC2O43543 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 RPS8P6-201ENST00000426177 609 ntBASIC13.9□□□□□ -0.18
XRCC2O43543 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 AC069335.1-201ENST00000489972 472 ntBASIC13.9□□□□□ -0.18
XRCC2O43543 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 SLC25A39P2-201ENST00000537614 270 ntBASIC13.9□□□□□ -0.18
XRCC2O43543 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 AC105339.1-204ENST00000636249 355 ntBASIC13.9□□□□□ -0.18
XRCC2O43543 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
XRCC2O43543 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.9□□□□□ -0.18
XRCC2O43543 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
XRCC2O43543 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.9□□□□□ -0.18
XRCC2O43543 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.9□□□□□ -0.19
XRCC2O43543 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
XRCC2O43543 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
XRCC2O43543 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
XRCC2O43543 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.89□□□□□ -0.19
XRCC2O43543 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.89□□□□□ -0.19
XRCC2O43543 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.89□□□□□ -0.19
XRCC2O43543 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
XRCC2O43543 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
XRCC2O43543 AC005237.2-201ENST00000434368 219 ntBASIC13.89□□□□□ -0.19
XRCC2O43543 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.89□□□□□ -0.19
XRCC2O43543 YBX1P5-201ENST00000509441 847 ntBASIC13.89□□□□□ -0.19
XRCC2O43543 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.89□□□□□ -0.19
XRCC2O43543 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.89□□□□□ -0.19
XRCC2O43543 AC022145.2-201ENST00000598203 171 ntBASIC13.89□□□□□ -0.19
XRCC2O43543 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
XRCC2O43543 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.89□□□□□ -0.19
XRCC2O43543 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 PRAL-201ENST00000624952 3286 ntBASIC13.89□□□□□ -0.19
XRCC2O43543 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms