Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 WASH6P-202ENST00000359512 1437 ntBASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC139749.1-202ENST00000617529 3139 ntBASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AGAP7P-201ENST00000582299 2062 ntBASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AGAP14-201ENST00000624701 2060 ntBASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 PRYP6-201ENST00000514804 343 ntBASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 RNA5SP419-201ENST00000515908 135 ntBASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AL161645.1-201ENST00000622716 1255 ntBASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.36□□□□□ -0.27
TRBV6-7A0A0A0MS04 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC134407.2-201ENST00000625089 1978 ntBASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 AP001005.1-201ENST00000571755 1248 ntBASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRBV6-7A0A0A0MS04 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms