Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 LINC02560-201ENST00000596379 459 ntBASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 AC008761.3-201ENST00000624803 892 ntBASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A3BPQ9Y5P4 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 AL035633.1-201ENST00000406139 838 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 TERF1P3-201ENST00000505638 1227 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 AC009407.1-201ENST00000568958 598 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A3BPQ9Y5P4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SERBP1P3-201ENST00000459980 809 ntBASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 RN7SL618P-201ENST00000477850 296 ntBASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SERBP1P5-201ENST00000510079 1181 ntBASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 AL512361.1-201ENST00000554200 418 ntBASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 CYP4F24P-201ENST00000586049 1580 ntBASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A3BPQ9Y5P4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A3BPQ9Y5P4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms