Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 AP006547.1-201ENST00000563435 692 ntBASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC29.94■■■□□ 2.38
SHROOM4Q9ULL8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 UPF3AP2-201ENST00000457924 1132 ntBASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 AC006449.6-201ENST00000612330 2296 ntBASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 AKR7A2P1-201ENST00000460134 915 ntBASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 RERG-205ENST00000537647 935 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 MIR4706-201ENST00000582134 82 ntBASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
SHROOM4Q9ULL8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 REXO1L1P-202ENST00000608646 1974 ntBASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 AC022137.2-201ENST00000503482 481 ntBASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 AC138627.1-207ENST00000641560 1006 ntBASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM4Q9ULL8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 AL662890.1-201ENST00000396818 632 ntBASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 MPRIPP1-201ENST00000452433 1089 ntBASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 RPS2P36-201ENST00000456516 831 ntBASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM4Q9ULL8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC29.9■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms