Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 RN7SL692P-201ENST00000464677 288 ntBASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 HNRNPUP1-201ENST00000554987 333 ntBASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20BQ9P0W2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 AL391825.1-201ENST00000457671 1364 ntBASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HMG20BQ9P0W2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 DGCR5-201ENST00000399539 862 ntBASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 AC027307.3-201ENST00000594262 1100 ntBASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 AL035252.4-201ENST00000624174 288 ntBASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.33■□□□□ 0.68
HMG20BQ9P0W2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AC005034.1-201ENST00000426657 489 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 MEIS3P1-201ENST00000495167 958 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AC055876.2-201ENST00000531834 546 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 WASH4P-201ENST00000564273 1246 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AL450472.2-201ENST00000603663 1156 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 AC097359.3-201ENST00000603982 1210 ntBASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20BQ9P0W2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms