Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AC015922.1-201ENST00000421102 1152 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 FAM207CP-201ENST00000443486 507 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AC104794.3-201ENST00000566840 1248 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 SRD5A3P1-201ENST00000603021 949 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 AP003680.1-201ENST00000598970 3660 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 PRAL-201ENST00000624952 3286 ntBASIC16.21■□□□□ 0.19
TMEM248Q9NWD8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM248Q9NWD8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM248Q9NWD8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM248Q9NWD8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.21■□□□□ 0.18
TMEM248Q9NWD8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 MIR661-201ENST00000384842 89 ntBASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 TOMM22P5-201ENST00000416399 439 ntBASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 KRT18P64-201ENST00000434946 1219 ntBASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 TIMM17BP1-201ENST00000545713 516 ntBASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEM248Q9NWD8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms