Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AL136379.1-201ENST00000623471 2642 ntBASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 OR2I1P-209ENST00000641730 5365 ntBASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 AL773604.1-201ENST00000617417 272 ntBASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 AL161645.1-201ENST00000622716 1255 ntBASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.01□□□□□ -0.65
CDC42SE2Q9NRR3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 OR2I1P-210ENST00000642037 4691 ntBASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 POR-201ENST00000394893 2532 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE2Q9NRR3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms