Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC027307.2-201ENST00000591252 911 ntBASIC14.18□□□□□ -0.14
VRK1Q99986 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
VRK1Q99986 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VRK1Q99986 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK1Q99986 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 FAM58DP-201ENST00000428076 619 ntBASIC14.17□□□□□ -0.14
VRK1Q99986 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 CNN2P2-201ENST00000443536 909 ntBASIC14.17□□□□□ -0.14
VRK1Q99986 CNN2P3-201ENST00000450201 906 ntBASIC14.17□□□□□ -0.14
VRK1Q99986 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 AC067863.1-201ENST00000494933 530 ntBASIC14.17□□□□□ -0.14
VRK1Q99986 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.17□□□□□ -0.14
VRK1Q99986 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.17□□□□□ -0.14
VRK1Q99986 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.17□□□□□ -0.14
VRK1Q99986 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 AL136317.3-201ENST00000618497 906 ntBASIC14.17□□□□□ -0.14
VRK1Q99986 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.17□□□□□ -0.14
VRK1Q99986 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VRK1Q99986 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VRK1Q99986 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK1Q99986 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms