Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC025183.3-201ENST00000623526 1482 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 REXO1L1P-202ENST00000608646 1974 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC092570.1-201ENST00000414446 469 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 EEF1DP4-201ENST00000446006 880 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MST1L-204ENST00000545160 559 ntTSL 4 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PTGER4P2-201ENST00000328411 252 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 PTGER4P3-201ENST00000458150 252 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC092896.1-201ENST00000465850 380 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 MIR6746-201ENST00000620971 63 ntBASIC4.69□□□□□ -1.66
HMCN1Q96RW7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC4.69□□□□□ -1.66
HMCN1Q96RW7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC092068.3-201ENST00000587894 2016 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RN7SKP109-201ENST00000410592 316 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 KRT8P39-201ENST00000396270 1433 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 BID-204ENST00000399767 2129 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC148477.4-201ENST00000613430 1793 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms