Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 AC093724.1-201ENST00000448659 1027 ntBASIC14.61□□□□□ -0.07
SNX18Q96RF0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 MIR3687-2-201ENST00000577708 61 ntBASIC14.61□□□□□ -0.07
SNX18Q96RF0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 AL009183.1-201ENST00000603760 355 ntBASIC14.61□□□□□ -0.07
SNX18Q96RF0 MIR3687-1-201ENST00000614492 61 ntBASIC14.61□□□□□ -0.07
SNX18Q96RF0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX18Q96RF0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX18Q96RF0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 LINC00528-201ENST00000600723 2160 ntBASIC14.6□□□□□ -0.07
SNX18Q96RF0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AC023274.1-201ENST00000418278 595 ntBASIC14.6□□□□□ -0.07
SNX18Q96RF0 KRT18P34-201ENST00000488218 1270 ntBASIC14.6□□□□□ -0.07
SNX18Q96RF0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AL365330.1-201ENST00000607459 531 ntBASIC14.6□□□□□ -0.07
SNX18Q96RF0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 AP005117.1-202ENST00000581724 1908 ntBASIC14.6□□□□□ -0.07
SNX18Q96RF0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNX18Q96RF0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX18Q96RF0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.59□□□□□ -0.07
SNX18Q96RF0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 AC007191.1-201ENST00000623179 2995 ntBASIC14.59□□□□□ -0.07
SNX18Q96RF0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNX18Q96RF0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms