Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
FGD4Q96M96 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.97■□□□□ 0.47
FGD4Q96M96 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 HAUS4P1-201ENST00000406739 1145 ntBASIC17.97■□□□□ 0.47
FGD4Q96M96 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.97■□□□□ 0.47
FGD4Q96M96 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.97■□□□□ 0.47
FGD4Q96M96 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.97■□□□□ 0.47
FGD4Q96M96 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.97■□□□□ 0.47
FGD4Q96M96 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.97■□□□□ 0.47
FGD4Q96M96 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.97■□□□□ 0.47
FGD4Q96M96 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.97■□□□□ 0.47
FGD4Q96M96 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.97■□□□□ 0.47
FGD4Q96M96 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.97■□□□□ 0.47
FGD4Q96M96 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.97■□□□□ 0.47
FGD4Q96M96 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 INTS4P2-202ENST00000614726 2019 ntBASIC17.97■□□□□ 0.47
FGD4Q96M96 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
FGD4Q96M96 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 OR6D1P-203ENST00000641209 4860 ntBASIC17.97■□□□□ 0.47
FGD4Q96M96 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.97■□□□□ 0.47
FGD4Q96M96 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FGD4Q96M96 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
FGD4Q96M96 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
FGD4Q96M96 AL607033.1-201ENST00000623900 1599 ntBASIC17.96■□□□□ 0.47
FGD4Q96M96 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
FGD4Q96M96 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
FGD4Q96M96 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.96■□□□□ 0.47
FGD4Q96M96 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.96■□□□□ 0.47
FGD4Q96M96 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.96■□□□□ 0.47
FGD4Q96M96 TDH-203ENST00000531764 1110 ntBASIC17.96■□□□□ 0.47
FGD4Q96M96 CLUHP6-201ENST00000580789 941 ntBASIC17.96■□□□□ 0.47
FGD4Q96M96 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FGD4Q96M96 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.96■□□□□ 0.47
FGD4Q96M96 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FGD4Q96M96 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
FGD4Q96M96 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
FGD4Q96M96 FER1L4-210ENST00000615531 5998 ntBASIC17.95■□□□□ 0.46
FGD4Q96M96 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
FGD4Q96M96 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FGD4Q96M96 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 MSTO2P-201ENST00000314835 1709 ntBASIC17.95■□□□□ 0.46
FGD4Q96M96 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.95■□□□□ 0.46
FGD4Q96M96 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.95■□□□□ 0.46
FGD4Q96M96 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.95■□□□□ 0.46
FGD4Q96M96 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FGD4Q96M96 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FGD4Q96M96 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 AC099336.1-201ENST00000417053 1171 ntBASIC17.95■□□□□ 0.46
FGD4Q96M96 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
FGD4Q96M96 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
FGD4Q96M96 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.95■□□□□ 0.46
FGD4Q96M96 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FGD4Q96M96 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.95■□□□□ 0.46
FGD4Q96M96 CTBP2P5-201ENST00000454986 1264 ntBASIC17.95■□□□□ 0.46
FGD4Q96M96 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.95■□□□□ 0.46
FGD4Q96M96 AP001889.1-201ENST00000525414 633 ntBASIC17.95■□□□□ 0.46
FGD4Q96M96 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms