Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 MIR940-201ENST00000401276 94 ntBASIC14.73□□□□□ -0.05
HPS1Q92902 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
HPS1Q92902 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 AC098831.1-202ENST00000438821 336 ntBASIC14.73□□□□□ -0.05
HPS1Q92902 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 PRYP5-201ENST00000451909 266 ntBASIC14.73□□□□□ -0.05
HPS1Q92902 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.73□□□□□ -0.05
HPS1Q92902 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 AC073592.4-201ENST00000623827 446 ntBASIC14.73□□□□□ -0.05
HPS1Q92902 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 AC132938.5-201ENST00000624980 1813 ntBASIC14.73□□□□□ -0.05
HPS1Q92902 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HPS1Q92902 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
HPS1Q92902 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.73□□□□□ -0.05
HPS1Q92902 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HPS1Q92902 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 AC004817.3-201ENST00000602957 2129 ntBASIC14.72□□□□□ -0.05
HPS1Q92902 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HPS1Q92902 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.72□□□□□ -0.05
HPS1Q92902 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.72□□□□□ -0.05
HPS1Q92902 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.72□□□□□ -0.05
HPS1Q92902 MED15P5-201ENST00000423150 992 ntBASIC14.72□□□□□ -0.05
HPS1Q92902 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.72□□□□□ -0.05
HPS1Q92902 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 AC006557.2-201ENST00000592985 1240 ntBASIC14.72□□□□□ -0.05
HPS1Q92902 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms