Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AC091046.1-201ENST00000331871 207 ntBASIC16.91■□□□□ 0.3
HERVK_113Q902F9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AL133267.1-201ENST00000398220 340 ntBASIC16.91■□□□□ 0.3
HERVK_113Q902F9 CYP46A4P-201ENST00000414953 267 ntBASIC16.91■□□□□ 0.3
HERVK_113Q902F9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 CNN2P10-201ENST00000443067 918 ntBASIC16.91■□□□□ 0.3
HERVK_113Q902F9 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 CU633904.3-201ENST00000624042 1029 ntBASIC16.91■□□□□ 0.3
HERVK_113Q902F9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERVK_113Q902F9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 AC104457.1-201ENST00000401024 814 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 AC016700.1-201ENST00000429424 312 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 MAGEA5-201ENST00000446757 942 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 RN7SL720P-201ENST00000488178 304 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 AC245884.6-201ENST00000515672 1067 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 MIR5572-201ENST00000583188 137 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.9■□□□□ 0.3
HERVK_113Q902F9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERVK_113Q902F9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HERVK_113Q902F9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HERVK_113Q902F9 PCDHB18P-201ENST00000524813 2368 ntBASIC16.89■□□□□ 0.3
HERVK_113Q902F9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
HERVK_113Q902F9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HERVK_113Q902F9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 AL138799.1-201ENST00000448213 1675 ntBASIC16.89■□□□□ 0.29
HERVK_113Q902F9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERVK_113Q902F9 MIR33B-201ENST00000385104 96 ntBASIC16.89■□□□□ 0.29
HERVK_113Q902F9 MIR769-201ENST00000390225 118 ntBASIC16.89■□□□□ 0.29
HERVK_113Q902F9 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.89■□□□□ 0.29
HERVK_113Q902F9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms