Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 FAM8A2P-201ENST00000528813 1142 ntBASIC15.94■□□□□ 0.14
HMGB4Q8WW32 PTP4A1P2-201ENST00000546033 454 ntBASIC15.94■□□□□ 0.14
HMGB4Q8WW32 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 MIR4538-201ENST00000581377 78 ntBASIC15.94■□□□□ 0.14
HMGB4Q8WW32 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGB4Q8WW32 AC093525.8-201ENST00000624099 1342 ntBASIC15.94■□□□□ 0.14
HMGB4Q8WW32 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 RPL13AP25-201ENST00000484130 612 ntBASIC15.93■□□□□ 0.14
HMGB4Q8WW32 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGB4Q8WW32 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 SLED1-202ENST00000512051 380 ntBASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AC068587.3-201ENST00000526613 355 ntBASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AL049840.4-201ENST00000602422 811 ntBASIC15.92■□□□□ 0.14
HMGB4Q8WW32 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AC134407.2-201ENST00000625089 1978 ntBASIC15.92■□□□□ 0.14
HMGB4Q8WW32 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms