Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 AC010331.1-201ENST00000611423 582 ntBASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00308Q8TCZ7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC079781.5-202ENST00000641784 3743 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 KRT18P38-201ENST00000449496 1282 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 HOMER2P1-201ENST00000455653 964 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 SNORA78-201ENST00000459373 127 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 YBX1P2-201ENST00000489612 999 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC008550.1-201ENST00000511500 884 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AL160237.2-201ENST00000556165 472 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 AC073592.4-201ENST00000623827 446 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 BEND3P1-201ENST00000421591 1944 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 NCF1C-201ENST00000438382 1427 ntBASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00308Q8TCZ7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00308Q8TCZ7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms