Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SPDYE17-201ENST00000412399 783 ntBASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 AL512356.2-201ENST00000546955 174 ntBASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 MIR6080-201ENST00000617359 66 ntBASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 AC090616.6-203ENST00000579186 1945 ntBASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH19Q8TAB3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 HIST3H2BA-201ENST00000436555 524 ntBASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 FAM86GP-201ENST00000448322 971 ntBASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 LINC02084-201ENST00000606069 1096 ntBASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH19Q8TAB3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 AC011467.4-201ENST00000594891 528 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms