Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 SPDYE14P-201ENST00000442619 822 ntBASIC19.05■□□□□ 0.64
RNF20Q5VTR2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 AC003101.2-201ENST00000612557 442 ntBASIC19.05■□□□□ 0.64
RNF20Q5VTR2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 CICP13-201ENST00000422015 2789 ntBASIC19.05■□□□□ 0.64
RNF20Q5VTR2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 AC067930.6-201ENST00000623257 4947 ntBASIC19.05■□□□□ 0.64
RNF20Q5VTR2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF20Q5VTR2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 CNN2P11-201ENST00000429351 262 ntBASIC19.04■□□□□ 0.64
RNF20Q5VTR2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 PHKG1P2-201ENST00000457537 863 ntBASIC19.04■□□□□ 0.64
RNF20Q5VTR2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 AC007967.4-201ENST00000614700 386 ntBASIC19.04■□□□□ 0.64
RNF20Q5VTR2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 AL035456.1-201ENST00000456064 1369 ntBASIC19.04■□□□□ 0.64
RNF20Q5VTR2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF20Q5VTR2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 AC020658.6-201ENST00000623564 1870 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 KRT18P13-201ENST00000400056 1290 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 SPDYE7P-202ENST00000420373 878 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 AC004967.1-201ENST00000453589 447 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 SNHG9-202ENST00000564014 471 ntBASIC19.03■□□□□ 0.64
RNF20Q5VTR2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF20Q5VTR2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms