Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
VPS13DQ5THJ4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 AL354989.2-201ENST00000435838 1540 ntBASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 CHMP1AP1-201ENST00000445563 662 ntBASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 AC100850.1-201ENST00000506768 649 ntBASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 AP003419.4-201ENST00000616071 517 ntBASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VPS13DQ5THJ4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 RN7SL555P-201ENST00000584742 339 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AC007787.1-201ENST00000588095 1583 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AC244452.3-201ENST00000636814 210 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AC104784.1-201ENST00000473096 294 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AC022188.1-201ENST00000620960 1664 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 HLA-DQB2-229ENST00000411527 1059 ntBASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VPS13DQ5THJ4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AC004466.1-201ENST00000599515 1080 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 MEG3_2.1-201ENST00000611456 105 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AC079178.1-201ENST00000420915 656 ntBASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC10.44□□□□□ -0.74
VPS13DQ5THJ4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms