Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.51■□□□□ 0.39
UBXN1Q04323 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBXN1Q04323 AC243562.2-201ENST00000561247 970 ntBASIC17.51■□□□□ 0.39
UBXN1Q04323 PDPK2P-202ENST00000562415 1191 ntBASIC17.51■□□□□ 0.39
UBXN1Q04323 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.51■□□□□ 0.39
UBXN1Q04323 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 AC073389.1-201ENST00000595595 795 ntBASIC17.51■□□□□ 0.39
UBXN1Q04323 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.51■□□□□ 0.39
UBXN1Q04323 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.51■□□□□ 0.39
UBXN1Q04323 SPTSSB-204ENST00000617024 1292 ntBASIC17.51■□□□□ 0.39
UBXN1Q04323 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
UBXN1Q04323 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
UBXN1Q04323 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBXN1Q04323 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.51■□□□□ 0.39
UBXN1Q04323 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
UBXN1Q04323 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBXN1Q04323 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AL691432.1-201ENST00000596308 1422 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 AC126755.1-201ENST00000525846 6405 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.5■□□□□ 0.39
UBXN1Q04323 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 RPL13AP23-201ENST00000480739 586 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.5■□□□□ 0.39
UBXN1Q04323 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.5■□□□□ 0.39
UBXN1Q04323 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 AC061975.2-201ENST00000581722 295 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 AC024267.1-201ENST00000582320 895 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 AL513190.1-201ENST00000621254 727 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.5■□□□□ 0.39
UBXN1Q04323 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.5■□□□□ 0.39
UBXN1Q04323 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBXN1Q04323 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.5■□□□□ 0.39
UBXN1Q04323 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBXN1Q04323 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBXN1Q04323 AC112693.3-201ENST00000624819 1983 ntBASIC17.49■□□□□ 0.39
UBXN1Q04323 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBXN1Q04323 BNIP3P1-202ENST00000550043 1585 ntBASIC17.49■□□□□ 0.39
UBXN1Q04323 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBXN1Q04323 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
UBXN1Q04323 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
UBXN1Q04323 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBXN1Q04323 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UBXN1Q04323 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms