Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.02■□□□□ 0.32
CDR2Q01850 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.02■□□□□ 0.32
CDR2Q01850 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.02■□□□□ 0.32
CDR2Q01850 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.02■□□□□ 0.32
CDR2Q01850 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 AC073347.1-201ENST00000421633 2643 ntBASIC17.02■□□□□ 0.32
CDR2Q01850 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDR2Q01850 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDR2Q01850 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDR2Q01850 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.02■□□□□ 0.31
CDR2Q01850 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDR2Q01850 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDR2Q01850 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDR2Q01850 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.02■□□□□ 0.31
CDR2Q01850 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
CDR2Q01850 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDR2Q01850 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDR2Q01850 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.01■□□□□ 0.31
CDR2Q01850 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.01■□□□□ 0.31
CDR2Q01850 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDR2Q01850 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDR2Q01850 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDR2Q01850 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDR2Q01850 GPS2P2-201ENST00000430745 888 ntBASIC17.01■□□□□ 0.31
CDR2Q01850 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.01■□□□□ 0.31
CDR2Q01850 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.01■□□□□ 0.31
CDR2Q01850 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDR2Q01850 AC004835.2-201ENST00000603762 682 ntBASIC17.01■□□□□ 0.31
CDR2Q01850 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.01■□□□□ 0.31
CDR2Q01850 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.01■□□□□ 0.31
CDR2Q01850 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.01■□□□□ 0.31
CDR2Q01850 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDR2Q01850 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 PPT1-215ENST00000641471 2368 ntBASIC17.01■□□□□ 0.31
CDR2Q01850 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDR2Q01850 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.01■□□□□ 0.31
CDR2Q01850 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.01■□□□□ 0.31
CDR2Q01850 AC136621.1-201ENST00000624017 2304 ntBASIC17.01■□□□□ 0.31
CDR2Q01850 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CDR2Q01850 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDR2Q01850 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 AC105250.1-201ENST00000509378 2057 ntBASIC17■□□□□ 0.31
CDR2Q01850 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 AC013268.4-201ENST00000637413 2228 ntBASIC17■□□□□ 0.31
CDR2Q01850 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDR2Q01850 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17■□□□□ 0.31
CDR2Q01850 AL353705.2-201ENST00000428243 662 ntBASIC17■□□□□ 0.31
CDR2Q01850 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 BANF1P1-201ENST00000553684 263 ntBASIC17■□□□□ 0.31
CDR2Q01850 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17■□□□□ 0.31
CDR2Q01850 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 AL450472.2-201ENST00000603663 1156 ntBASIC17■□□□□ 0.31
CDR2Q01850 AC018529.1-201ENST00000613063 361 ntBASIC17■□□□□ 0.31
CDR2Q01850 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17■□□□□ 0.31
CDR2Q01850 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 AC092127.1-201ENST00000567093 3455 ntBASIC17■□□□□ 0.31
CDR2Q01850 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CDR2Q01850 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17■□□□□ 0.31
CDR2Q01850 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDR2Q01850 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17■□□□□ 0.31
CDR2Q01850 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms