Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PHC1P78364 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 CICP4-201ENST00000447359 2812 ntBASIC15.25■□□□□ 0.03
PHC1P78364 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PHC1P78364 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.25■□□□□ 0.03
PHC1P78364 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 PDPK2P-202ENST00000562415 1191 ntBASIC15.25■□□□□ 0.03
PHC1P78364 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.25■□□□□ 0.03
PHC1P78364 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.25■□□□□ 0.03
PHC1P78364 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.25■□□□□ 0.03
PHC1P78364 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PHC1P78364 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PHC1P78364 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.25■□□□□ 0.03
PHC1P78364 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.24■□□□□ 0.03
PHC1P78364 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.24■□□□□ 0.03
PHC1P78364 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.24■□□□□ 0.03
PHC1P78364 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 AC061975.2-201ENST00000581722 295 ntBASIC15.24■□□□□ 0.03
PHC1P78364 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 AC087481.3-201ENST00000602886 1894 ntBASIC15.24■□□□□ 0.03
PHC1P78364 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.24■□□□□ 0.03
PHC1P78364 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.24■□□□□ 0.03
PHC1P78364 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHC1P78364 AL009178.2-201ENST00000597278 2719 ntBASIC15.23■□□□□ 0.03
PHC1P78364 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.23■□□□□ 0.03
PHC1P78364 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.23■□□□□ 0.03
PHC1P78364 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHC1P78364 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHC1P78364 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHC1P78364 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHC1P78364 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHC1P78364 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PHC1P78364 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.23■□□□□ 0.03
PHC1P78364 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.23■□□□□ 0.03
PHC1P78364 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms