Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3P56703 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.09■□□□□ 0.01
WNT3P56703 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.09■□□□□ 0.01
WNT3P56703 AL513210.1-201ENST00000629608 234 ntBASIC15.09■□□□□ 0.01
WNT3P56703 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.09■□□□□ 0.01
WNT3P56703 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.09■□□□□ 0.01
WNT3P56703 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.09■□□□□ 0.01
WNT3P56703 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
WNT3P56703 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
WNT3P56703 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.08■□□□□ 0.01
WNT3P56703 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.08■□□□□ 0.01
WNT3P56703 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
WNT3P56703 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.08■□□□□ 0
WNT3P56703 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 CYP4F24P-201ENST00000586049 1580 ntBASIC15.08■□□□□ 0
WNT3P56703 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.08■□□□□ 0
WNT3P56703 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.08■□□□□ 0
WNT3P56703 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.08■□□□□ 0
WNT3P56703 TSEN15P1-201ENST00000423257 515 ntBASIC15.08■□□□□ 0
WNT3P56703 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.08■□□□□ 0
WNT3P56703 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.08■□□□□ 0
WNT3P56703 EEF1DP4-201ENST00000446006 880 ntBASIC15.08■□□□□ 0
WNT3P56703 RN7SL589P-201ENST00000481268 310 ntBASIC15.08■□□□□ 0
WNT3P56703 AC079140.1-201ENST00000508039 487 ntBASIC15.08■□□□□ 0
WNT3P56703 AP000344.2-201ENST00000512987 629 ntBASIC15.08■□□□□ 0
WNT3P56703 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 RFPL4AP1-201ENST00000530883 850 ntBASIC15.08■□□□□ 0
WNT3P56703 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.08■□□□□ 0
WNT3P56703 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 AC026120.1-201ENST00000611536 926 ntBASIC15.08■□□□□ 0
WNT3P56703 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
WNT3P56703 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
WNT3P56703 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.08■□□□□ 0
WNT3P56703 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.08■□□□□ 0
WNT3P56703 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
WNT3P56703 AC127383.1-201ENST00000444697 1800 ntBASIC15.08■□□□□ 0
WNT3P56703 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
WNT3P56703 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.08■□□□□ 0
WNT3P56703 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
WNT3P56703 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.07■□□□□ 0
WNT3P56703 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 TSPY26P-202ENST00000565928 3884 ntBASIC15.07■□□□□ 0
WNT3P56703 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
WNT3P56703 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
WNT3P56703 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.07■□□□□ 0
WNT3P56703 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
WNT3P56703 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.07■□□□□ 0
WNT3P56703 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.07■□□□□ 0
WNT3P56703 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.07■□□□□ 0
WNT3P56703 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.07■□□□□ 0
WNT3P56703 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.07■□□□□ 0
WNT3P56703 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.07■□□□□ 0
WNT3P56703 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.07■□□□□ 0
WNT3P56703 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.07■□□□□ 0
WNT3P56703 AC084121.4-201ENST00000641598 221 ntBASIC15.07■□□□□ 0
WNT3P56703 AF228730.8-201ENST00000642140 221 ntBASIC15.07■□□□□ 0
WNT3P56703 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
WNT3P56703 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms