Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 AC020658.6-201ENST00000623564 1870 ntBASIC15.34■□□□□ 0.05
SH3BGRP55822 MROH4P-201ENST00000431302 1578 ntBASIC15.34■□□□□ 0.05
SH3BGRP55822 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 PRYP5-201ENST00000451909 266 ntBASIC15.34■□□□□ 0.05
SH3BGRP55822 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.34■□□□□ 0.05
SH3BGRP55822 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.34■□□□□ 0.05
SH3BGRP55822 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.34■□□□□ 0.05
SH3BGRP55822 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.34■□□□□ 0.05
SH3BGRP55822 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SH3BGRP55822 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.34■□□□□ 0.05
SH3BGRP55822 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3BGRP55822 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3BGRP55822 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SH3BGRP55822 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SH3BGRP55822 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.33■□□□□ 0.05
SH3BGRP55822 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.33■□□□□ 0.05
SH3BGRP55822 CR383656.2-201ENST00000548656 2254 ntBASIC15.33■□□□□ 0.05
SH3BGRP55822 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.33■□□□□ 0.05
SH3BGRP55822 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SH3BGRP55822 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SH3BGRP55822 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SH3BGRP55822 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.33■□□□□ 0.05
SH3BGRP55822 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SH3BGRP55822 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SH3BGRP55822 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SH3BGRP55822 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.33■□□□□ 0.04
SH3BGRP55822 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.33■□□□□ 0.04
SH3BGRP55822 EMBP1-201ENST00000458200 901 ntBASIC15.33■□□□□ 0.04
SH3BGRP55822 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.33■□□□□ 0.04
SH3BGRP55822 AF238378.1-201ENST00000526806 358 ntBASIC15.33■□□□□ 0.04
SH3BGRP55822 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 AC064862.7-201ENST00000604520 867 ntBASIC15.33■□□□□ 0.04
SH3BGRP55822 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 AL022326.1-202ENST00000641533 845 ntBASIC15.33■□□□□ 0.04
SH3BGRP55822 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SH3BGRP55822 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.33■□□□□ 0.04
SH3BGRP55822 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH3BGRP55822 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SH3BGRP55822 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH3BGRP55822 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SH3BGRP55822 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms