Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
LIMK1P53667 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LIMK1P53667 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LIMK1P53667 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
LIMK1P53667 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LIMK1P53667 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.71■□□□□ 0.1
LIMK1P53667 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIMK1P53667 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LIMK1P53667 AC105917.1-201ENST00000506637 2539 ntBASIC15.7■□□□□ 0.1
LIMK1P53667 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LIMK1P53667 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 KRT8P39-201ENST00000396270 1433 ntBASIC15.7■□□□□ 0.1
LIMK1P53667 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.7■□□□□ 0.1
LIMK1P53667 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LIMK1P53667 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.7■□□□□ 0.1
LIMK1P53667 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.7■□□□□ 0.1
LIMK1P53667 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LIMK1P53667 BRI3BPP1-201ENST00000594224 787 ntBASIC15.7■□□□□ 0.1
LIMK1P53667 RHOXF1P1-202ENST00000635473 501 ntBASIC15.7■□□□□ 0.1
LIMK1P53667 AC008687.7-202ENST00000637404 953 ntBASIC15.7■□□□□ 0.1
LIMK1P53667 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.7■□□□□ 0.1
LIMK1P53667 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIMK1P53667 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LIMK1P53667 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 TUBB8P12-201ENST00000308911 1335 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 TUBB7P-202ENST00000428444 1305 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 TUBB8P7-204ENST00000567960 1332 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LIMK1P53667 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LIMK1P53667 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.69■□□□□ 0.1
LIMK1P53667 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 MIR663B-201ENST00000408361 115 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 AC016694.1-201ENST00000434179 700 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.69■□□□□ 0.1
LIMK1P53667 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.69■□□□□ 0.1
LIMK1P53667 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.69■□□□□ 0.1
LIMK1P53667 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.69■□□□□ 0.1
LIMK1P53667 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LIMK1P53667 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.69■□□□□ 0.1
LIMK1P53667 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK1P53667 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LIMK1P53667 AL021578.1-201ENST00000613646 709 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 AC009542.2-202ENST00000619004 1067 ntBASIC15.69■□□□□ 0.1
LIMK1P53667 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.69■□□□□ 0.1
LIMK1P53667 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LIMK1P53667 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LIMK1P53667 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms