Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 CNN2P8-201ENST00000421872 913 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 HNRNPUP1-201ENST00000554987 333 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC010328.2-201ENST00000597698 1111 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 AC107373.2-201ENST00000607735 490 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 AC068587.10-201ENST00000641210 219 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 LINC01144-201ENST00000626198 1710 ntBASIC13.79□□□□□ -0.2
HCFC1P51610 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HCFC1P51610 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 GOLGA2P4-201ENST00000441462 777 ntBASIC13.79□□□□□ -0.2
HCFC1P51610 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 PHKG1P2-201ENST00000457537 863 ntBASIC13.79□□□□□ -0.2
HCFC1P51610 AP000812.2-201ENST00000538934 718 ntBASIC13.79□□□□□ -0.2
HCFC1P51610 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.79□□□□□ -0.2
HCFC1P51610 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.79□□□□□ -0.2
HCFC1P51610 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HCFC1P51610 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
HCFC1P51610 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 AC007969.1-201ENST00000433675 447 ntBASIC13.78□□□□□ -0.2
HCFC1P51610 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.78□□□□□ -0.2
HCFC1P51610 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.78□□□□□ -0.2
HCFC1P51610 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 AC008741.2-201ENST00000612792 3115 ntBASIC13.78□□□□□ -0.2
HCFC1P51610 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
HCFC1P51610 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
HCFC1P51610 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.78□□□□□ -0.2
HCFC1P51610 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCFC1P51610 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.78□□□□□ -0.2
HCFC1P51610 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms