Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TUBP50607 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 AC006449.6-201ENST00000612330 2296 ntBASIC16.82■□□□□ 0.28
TUBP50607 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 AC104640.1-201ENST00000562617 2109 ntBASIC16.82■□□□□ 0.28
TUBP50607 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TUBP50607 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TUBP50607 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 CYP4F24P-201ENST00000586049 1580 ntBASIC16.82■□□□□ 0.28
TUBP50607 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 TSPY26P-202ENST00000565928 3884 ntBASIC16.82■□□□□ 0.28
TUBP50607 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 SERBP1P5-201ENST00000510079 1181 ntBASIC16.82■□□□□ 0.28
TUBP50607 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.82■□□□□ 0.28
TUBP50607 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBP50607 AC190387.1-201ENST00000551683 408 ntBASIC16.82■□□□□ 0.28
TUBP50607 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBP50607 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TUBP50607 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBP50607 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBP50607 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
TUBP50607 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBP50607 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBP50607 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBP50607 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBP50607 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBP50607 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TUBP50607 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 FO393414.2-201ENST00000405153 598 ntBASIC16.81■□□□□ 0.28
TUBP50607 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBP50607 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBP50607 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBP50607 SPTLC1P1-201ENST00000447199 261 ntBASIC16.81■□□□□ 0.28
TUBP50607 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.81■□□□□ 0.28
TUBP50607 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBP50607 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBP50607 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 AC008738.7-201ENST00000609744 511 ntBASIC16.81■□□□□ 0.28
TUBP50607 MIR6069-201ENST00000620069 79 ntBASIC16.81■□□□□ 0.28
TUBP50607 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBP50607 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBP50607 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBP50607 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBP50607 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms